dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004676_1|CGC2
Gene ID: MGYG000004676_00069
Location and strand information: 71764 - 73056 (+)
Family: GH23|CBM50
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.2524
Protein molecular weight: 49052.49
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004676_1|CGC2
Gene ID: MGYG000004676_00070
Location and strand information: 73129 - 75372 (+)
Family: HD
Protein type: STP
Protein description: GTP pyrophosphokinase

Gene clsuter ID: MGYG000004676_1|CGC2
Gene ID: MGYG000004676_00071
Location and strand information: 75377 - 75724 (-)
Family: MerR
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004676_1|CGC2
Gene ID: MGYG000004676_00072
Location and strand information: 75798 - 76766 (-)
Family: 1.A.34.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004676_1|CGC2
Gene ID: MGYG000004676_00073
Location and strand information: 76872 - 79490 (+)
Family: null
Protein type: null
Protein description: Alanine--tRNA ligase

Gene clsuter ID: MGYG000004676_1|CGC2
Gene ID: MGYG000004676_00074
Location and strand information: 79719 - 81971 (+)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0357
Protein molecular weight: 84971.01
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004676_1|CGC2
Gene ID: MGYG000004676_00075
Location and strand information: 81984 - 82547 (+)
Family: GerE
Protein type: TF
Protein description: RNA polymerase sigma factor FliA

Gene clsuter ID: MGYG000004676_1|CGC2
Gene ID: MGYG000004676_00076
Location and strand information: 82561 - 83586 (+)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004676_1|CGC2
Gene ID: MGYG000004676_00077
Location and strand information: 83600 - 85864 (+)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.0795
Protein molecular weight: 85262.65
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004676_1|CGC2
Gene ID: MGYG000004676_00078
Location and strand information: 85876 - 88149 (+)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3502
Protein molecular weight: 86904.18
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004676_1|CGC2
Gene ID: MGYG000004676_00079
Location and strand information: 88697 - 90046 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004676_1|CGC2
Gene ID: MGYG000004676_00080
Location and strand information: 90070 - 91503 (-)
Family: GH18
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.571
Protein molecular weight: 53020.75
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004676_1|CGC2
Gene ID: MGYG000004676_00081
Location and strand information: 91509 - 92660 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004676_1|CGC2
Gene ID: MGYG000004676_00082
Location and strand information: 92668 - 93741 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004676_1|CGC2
Gene ID: MGYG000004676_00083
Location and strand information: 93771 - 95396 (-)
Family: 8.A.46.2.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004676_1|CGC2
Gene ID: MGYG000004676_00084
Location and strand information: 95403 - 98786 (-)
Family: 1.B.14.6.13
Protein type: TC
Protein description: hypothetical protein

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000004676_00069	GH23_e640\|CBM50_e542
MGYG000004676_00074	GH92_e0\|3.2.1.114\|3.2.1.-	hostglycan
MGYG000004676_00077	GH92_e0\|3.2.1.114\|3.2.1.-	hostglycan
MGYG000004676_00078	GH92_e8\|3.2.1.113\|3.2.1.-	hostglycan
MGYG000004676_00080	GH18_e42\|3.2.1.96	hostglycan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is host glycan

Substrate predicted by dbCAN-PUL is mucin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004676_00069	hypothetical protein	CAZyme	71764	73056	+	GH23\| CBM50
MGYG000004676_00070	GTP pyrophosphokinase	STP	73129	75372	+	HD
MGYG000004676_00071	hypothetical protein	TF	75377	75724	-	MerR
MGYG000004676_00072	hypothetical protein	TC	75798	76766	-	1.A.34.1.3
MGYG000004676_00073	Alanine--tRNA ligase	null	76872	79490	+	tRNA-synt_2c\| tRNA_SAD\| DHHA1
MGYG000004676_00074	hypothetical protein	CAZyme	79719	81971	+	GH92
MGYG000004676_00075	RNA polymerase sigma factor FliA	TF	81984	82547	+	GerE
MGYG000004676_00076	hypothetical protein	STP	82561	83586	+	FecR
MGYG000004676_00077	hypothetical protein	CAZyme	83600	85864	+	GH92
MGYG000004676_00078	hypothetical protein	CAZyme	85876	88149	+	GH92
MGYG000004676_00079	hypothetical protein	null	88697	90046	-	DUF4989\| F5_F8_type_C
MGYG000004676_00080	hypothetical protein	CAZyme	90070	91503	-	GH18
MGYG000004676_00081	hypothetical protein	null	91509	92660	-	DUF1735\| Laminin_G_3
MGYG000004676_00082	hypothetical protein	null	92668	93741	-	DUF4849
MGYG000004676_00083	hypothetical protein	TC	93771	95396	-	8.A.46.2.2
MGYG000004676_00084	hypothetical protein	TC	95403	98786	-	1.B.14.6.13
Protein ID	Protein Name	Type	Start	End	Strand	Signature